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Complete Genome Sequence of Paraburkholderia phenoliruptrix T36S-14, a Plant Growth Promoting Bacterium on Tomato ( Solanum lycopersicum L.) Seedlings

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초록

Paraburkholderia phenoliruptrix T36S-14, identified as a potential plant growth-promoting bacterium, was isolated from the core microbiome of tomato rhizosphere soil. When assessed for its growth promotion, Strain T36S-14 demonstrated a notable 20% increase in the fresh weight of tomato seedlings. The strain possesses two circular chromosomes, one of 4,104,520 base pair (bp) (CP119873) and the other of 3,258,072 bp (CP119874), both exhibiting G+C contents of 63.5% and 62.7%, respectively. The chromosome comprises 6,319 protein-coding sequences, 65 transfer RNA genes, and 18 ribosomal RNA genes (5S: 6, 16S: 6, and 23S: 6). Additionally, P. phenoliruptrix T36S-14 produces siderophores that promote plant growth.

Abstract

Paraburkholderia phenoliruptrix T36S-14, identified as a potential plant growth-promoting bacterium, was isolated from the core microbiome of tomato rhizosphere soil. When assessed for its growth promotion, Strain T36S-14 demonstrated a notable 20% increase in the fresh weight of tomato seedlings. The strain possesses two circular chromosomes, one of 4,104,520 base pair (bp) (CP119873) and the other of 3,258,072 bp (CP119874), both exhibiting G+C contents of 63.5% and 62.7%, respectively. The chromosome comprises 6,319 protein-coding sequences, 65 transfer RNA genes, and 18 ribosomal RNA genes (5S: 6, 16S: 6, and 23S: 6). Additionally, P. phenoliruptrix T36S-14 produces siderophores that promote plant growth.

참고문헌 (11)

  1. Tatusova T, "NCBI prokaryotic genome annotation pipeline", Nucleic Acids Res, 44, pp.6614~6624 (2016)
  2. Lee I, "OrthoANI : an improved algorithm and software for calculating average nucleotide identity", Int. J. Syst. Evol. Microbiol, 66, pp.1100~1103 (2016)
  3. Rodriguez-R LM, "Bypassing cultivation to identify bacterial species", Microbe, 9, pp.111~118 (2014)
  4. Wibberg D, "High quality genome sequences of thirteen Hypoxylaceae(Ascomycota)strengthen the phylogenetic family backbone and enable the discovery of new taxa", Fungal Divers, 106, pp.7~28 (2020)
  5. Dias GM, "Comparative genomics of Paraburkholderia kururiensis and its potential in bioremediation, biofertilization, and biocontrol of plant pathogens", Microbiologyopen, 8, pp.e00801~ (2019)
  6. Sawana A, "Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species", Front. Genet, 5, pp.429~ (2014)
  7. Coenye T, "Burkholderia phenoliruptrix sp. nov., to accommodate the 2, 4, 5-trichlorophenoxyacetic acid and halophenol-degrading strain AC1100", Syst. Appl. Microbiol, 27, pp.623~627 (2004)
  8. Bellés-Sancho P, "Nitrogenfixing symbiotic Paraburkholderia species : Current knowledge and future perspectives", Nitgrogen, 4, pp.135~158 (2023)
  9. Blin K, "antiSMASH 7. 0 : new and improved predictions for detection, regulation, chemical structures and visualization", Nucleic Acids Res, 51, pp.46~50 (2023)
  10. Patten CL, "Bacterial biosynthesis of indole-3-acetic acid", Can. J. Microbiol, 42, pp.207~220 (1996)
  11. Singh RP, "Biochemistry and genetics of ACC deaminase : a weapon to"stress ethylene"produced in plants", Front. Microbiol, 6, pp.937~ (2015)

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