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Genome Sequence of the Yeast Strain Sporobolomyces phaffii RJAF-17, Which Produces the Lipoamino Acid Surfactants

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초록

We report the draft genome sequence of Sporobolomyces phaffii RJAF-17, a basidiomycetous yeast strain producing lipoamino acid surfactants, N-palmitoyl leucine and N-parmitoleyl glutamine. The annotation and classification of protein-coding genes provided the basic information for the genome of strain RJAF-17, including prediction of abundant genes as well as detection of genes involved in the biosynthesis of lipoamino acids. With the molecular importance of lipoamino acids as promising alternatives to chemical surfactants, the genomic information of strain RJAF-17 can help us understand the role of biomolecules in yeasts and explore possibilities of large-scale synthesis for industrial applications.

Abstract

We report the draft genome sequence of Sporobolomyces phaffii RJAF-17, a basidiomycetous yeast strain producing lipoamino acid surfactants, N-palmitoyl leucine and N-parmitoleyl glutamine. The annotation and classification of protein-coding genes provided the basic information for the genome of strain RJAF-17, including prediction of abundant genes as well as detection of genes involved in the biosynthesis of lipoamino acids. With the molecular importance of lipoamino acids as promising alternatives to chemical surfactants, the genomic information of strain RJAF-17 can help us understand the role of biomolecules in yeasts and explore possibilities of large-scale synthesis for industrial applications.

참고문헌 (10)

  1. Ernst C, "PanCake: A data structure for pangenomes", German Conference on Bioinformatics, 34 (2013)
  2. Vaser R, "Fast and accurate de novo genome assembly from long uncorrected reads", Genome Res, 27, pp.737~746 (2017)
  3. Manni M, "BUSCO Update : novel and streamlined workflows along with broader and deeeper phylogenetic coverage for scoring of eukaryotic, prokaryotic, and viral genomes", Mol. Biol. Evol, 38, pp.4647~4654 (2021)
  4. Stanke M, "Using native and syntenically mapped cDNA alignments to improve de novo gene finding", Bioinformatics, 24, pp.637~644 (2008)
  5. Cantalapiedra CP, "eggNOG-mapper v2 : Functional annotation, orthology assignments, and domain prediction at the metagenomic scale", Mol. Biol. Evol, 38, pp.5825~5829 (2021)
  6. Xie C, "KOBAS 2. 0 : a web server for annotation and identification of enriched pathways and diseases", Nucleic Acids Res, pp.39~ (2011)[DOI]
  7. Gerova M, "Self-assembly properties of some chiral N-palmitoyl amino acid surfactants in aqueous solution", J. Colloid Interface Sci, 319, pp.526~533 (2008)
  8. Ribeiro MHL, "Lipoaminoacids enzyme-based production and application as gene delivery vectors", Catalysts, 9, pp.977~ (2019)
  9. Stirrup R, "Aminolipids elicit functional trade-offs between competitiveness and bacteriophage attachment in Ruegeria pomeroyi", ISME J, 17, pp.315~325 (2023)
  10. Szotkowski M, "Study of metabolic adaptation of red yeasts to waste animal fat substrate", Microorganisms, 7, pp.578~ (2019)

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