Parmotrema clavuliferum and P. reticulatum are independent species
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Parmotrema clavuliferum (Räsänen) Streimann and P. reticulatum (Taylor) M. Choisy (Parmeliaceae, lichenized Ascomycotina) have similar morphological characters such as wide lobes with soralia, reticulatemaculate on upper surface of lobes, and marginal cilia. In addition, they both produce salazinic acid and atranorin as major chemical substances. These similar properties found in both species have led to confusion in recognizing them as distinct species; however, P. clavuliferum is distinguished from the latter by capitate soralia on short laciniae which are always mottled white and by the production of fatty acid and gyrophoric acid together with salazinic acid. In addition, the most likely phylogenetic tree of these species shows that they are nested in well-supported monophyletic groups. Therefore, it is reasonable to recognize them as two separate species, P. clavuliferum and P. reticulatum.
Abstract
Parmotrema clavuliferum (Räsänen) Streimann and P. reticulatum (Taylor) M. Choisy (Parmeliaceae, lichenized Ascomycotina) have similar morphological characters such as wide lobes with soralia, reticulatemaculate on upper surface of lobes, and marginal cilia. In addition, they both produce salazinic acid and atranorin as major chemical substances. These similar properties found in both species have led to confusion in recognizing them as distinct species; however, P. clavuliferum is distinguished from the latter by capitate soralia on short laciniae which are always mottled white and by the production of fatty acid and gyrophoric acid together with salazinic acid. In addition, the most likely phylogenetic tree of these species shows that they are nested in well-supported monophyletic groups. Therefore, it is reasonable to recognize them as two separate species, P. clavuliferum and P. reticulatum. Keywords: Parmotrema clavuliferum, Parmotrema reticulatum, separated species, lichens
참고문헌 (40)
- Aptroot, A., "Molecular phylogeny resolves a taxonomic misunderstanding and places Geisleria close to Absconditella s. str. (Ostropales : Stictidaceae)", The Lichenologist, 46, pp.115~128 (2014)
- Barbosa, S.B., "Comparative thallus anatomy of two Parmotrema(Parmeliaceae, lichenized Ascomycetes)with reticulate maculae", Acta Botanica Brasilica, 24(3), pp.803~811 (2010)
- Blanco, O., "Molecular phylogeny of parmotremoid lichens(Ascomycota, Parmeliaceae)", Mycologia, 97(1), pp.150~159 (2005)
- Crespo, A., "The potential of mitochondrial DNA for establishing phylogeny and stabilising generic concepts in the parmelioid lichens", Taxon, 50(3), pp.807~819 (2001)
- Crespo, A., "Cryptic species and species pairs in lichens: A discussion on the relationship between molecular phylogenies and morphological characters", Anales del Jardín Botánico de Madrid, 66(S1), pp.71~81 (2009)
- Culberson, C.F., "Substitution of methyl tert.-butyl ether for diethyl ether in the standardized thinlayer chromatographic method for lichen products", Journal of Chromatography A, 238(2), pp.483~487 (1982)
- DEL-PRADO, R., "Using genetic distances in addition to ITS molecular phylogeny to identify potential species in the Parmotrema reticulatum complex : a case study", The Lichenologist, 43, pp.569~583 (2011)
- Divakar, P. K., "Molecular phylogenetic studies on the Parmotrema reticulatum (syn. Rimelia reticulata) complex, including the confirmation of P. pseudoreticulatum as a distinct species", The Lichenologist, 37, pp.55~ (2005)
- Elix, J.A., "Additional lichen records from Oceania 7. Parmeliaceae from Fiji", Australasian Lichenology, 48, pp.34~37 (2001)
- Felsenstein, J., "Confidence limits on phylogenies; an approach using the bootstrap", Evolution, 39, pp.783~791 (1985)
- Gardes, M., "ITS primers with enhanced specificity for basidiomycetes application to the identification of mycorrhizae and rusts", Molecular Ecology, 2, pp.113~118 (1993)
- Hale, M.E., "Rimelia Hale & Fletcher, a new lichen genus (Ascomycotina: Parmeliaceae)", Bryologist, 93, pp.23~29 (1990)
- Hall, T. A., "BioEdit : a user-friendly biological sequence alignment editor and analysis program for Windows 95", 98, Nucleic Acids Symposium Series, pp.1999, 41[DOI]
- Hecher, K.H., "High and Low Annealing Temperatures Increase Both Specificity and Yield in Touchdown and Stepdown PCR", BioTechniques, 20, pp.478~485 (1996)
- Huelsenbeck, J.P., "MrBAYES: Bayesian inference of phylogenetic trees", Bioinformatics, 17, pp.754~755 (2001)
- Kashiwadani, H., "Lichens of Shodo-shima Island, Shikoku, Japan", Mem. Natn. Sci. Mus., Tokyo, (32), pp.99~113 (2000)
- Kashiwadani, H., "Lichens of the Cheju Island, Republic of Korea 1. The Macrolichens", Proc. 3rd & 4th Symp. Collection Building Nat. Hist. Stud. in Asia and the Pacific Rim, Natn. Sci. Mus. Monogr, (22), pp.115~135 (2002)
- Komine, M., "Distributions of foliose species of parmeliaceous lichens in northern Japan. Parmotrema chinense, Myelochroa leucotyliza and Rimelia clavulifera", Lichenology, 12(2), pp.75~78 (2014)
- Kurokawa, S., "Japanese species and genera of the Parmeliaceae", J. Jpn. Bot, 66(3), pp.152~159 (1991)
- Kurokawa, S., "Parmelioid lichen genera and species in Taiwan", Mycotaxon, 77, pp.225~284 (2001)
- Larget, B., "Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees", Molecular Biology and Evolution, 16, pp.750~759 (1999)
- Lendemer, J.C., "Chirleja buckii, a new genus and species of lichenized-fungi from Tierra del Fuego, southern South America", New Zealand Journal of Botany, 50, pp.449~456 (2012)
- Moon, K. H., "Lichens of Mt. Sorak in Korea", J. Hattori Bot. Lab, 86, pp.187~220 (1999)
- Moon, K. H., "A list of Thailand species of Parmelia (sens. lat.) preserved in TNS", Natn. Sci. Mus., Tokyo, Monograph, (18), pp.97~106 (2000)
- Moon, K. H., "The genus Rimelia (Lichens) from the Hawaiian Islands", J. Jpn. Bot, 76, pp.321~328 (2001)
- Ohmura, Y., "Recovery of macrolichen flora in the Imperial Palace Ground, Tokyo, Japan", J. Jpn. Bot, 87(1), pp.51~57 (2012)
- Ohmura, Y., "Morphology and molecular phylogeny of Ramalina pollinaria, R. sekika, and R. yasudae (Ramalinaceae, lichenized Ascomycotina)", J. Jpn. Bot, 83, pp.156~164 (2008)
- Park, Y. S., "The macrolichen flora of South Korea", The Bryologist, 93(2), pp.105~160 (1990)
- Posada, D., "ModelTest: Phylogenetic Model Averaging", Molecular biology and evolution, 25(7), pp.1253~1256 (2008)
- Räsänen, A. V., "Lichenes Novi I", Annales Botanici Societatis Zoologicae-Botanicae Fennicae “Vanamo”, 20, pp.1~34 (1944)
- Schoch, C. L., "Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi", Proceedings of the National Academy of Sciences (2012)
- Spielmann, A.A., "Parmotrema sl (Parmeliaceae, lichenized Ascomycota) from Serra Geral slopes in central Rio Grande do Sul State, Brazil", Hoehnea, 36(4), pp.551~595 (2009)
- Stamatakis, A., "RAxML Version 8: A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies", Bioinformatics, 30(9), pp.1312~1313 (2014)
- Streimann, H., "Catalogue of the Lichens of Papua New Guinea and Irian Jaya", Bibliotheca Lichenologica, 22, pp.145~ (1986)
- Swofford, D.L., "PAUP *: Phylogenetic Analysis Using Parsimony (*and Other Methods)" (2003), Sinauer Associates
- Tamura, K., "Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees", Molecular Biology and Evolution, 10(3), pp.512~526 (1993)
- Taylor, T., "Flora Hibernica, comprising the Flowering Plants, Characeae, Musci, Hepaticae, Lichenes and Algae of Ireland", pp.1~650 (1836), Dublin
- Thompson, J. D., "The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools", Nucleic Acids Research, 25, pp.4876~4882 (1997)
- White, T. J., "PCR Protocols", pp.315~322 (1990), Academic Press
- Zoller, S., "PCR primers for the amplification of mitochondrial small subunit ribosomal DNA of lichen-forming ascomycetes", Lichenologist, 31, pp.511~516 (1999)
