육우의 경제형질과 SNP간의 연관성 분석에 대한 연구현황(총설)
Current Status about Association of SNPs on Economic Traits in Beef Cattle (An Overview)
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초록
The purpose of the livestock industry is to pursuit economic profits by increasing the economic productivity of livestock. Single nucleotide polymorphisms (SNPs), that is characterized by one variation out of every 1000 polymorphisms, to increase economical benefits in stock breeding has been extensively studied. Particularly, replete number of investigations have been put forward that has associated SNPs of candidate genes with economically important traits such as carcass weight (CW), longissimus muscle area (LMA), backfat thickness (BFT) and marbling score (MS) in beef cattle. Bovine genome sequencing and HapMap projects have provided, millions of SNPs in the cattle genome. However, till date studies related to the association of the SNPs with economic traits in beef cattles are meager. Discovering of SNPs bovine whole genome would certainly be useful genetic assets for the development of SNP marker for economically important traits in beef cattle.
Abstract
The purpose of the livestock industry is to pursuit economic profits by increasing the economic productivity of livestock. Single nucleotide polymorphisms (SNPs), that is characterized by one variation out of every 1000 polymorphisms, to increase economical benefits in stock breeding has been extensively studied. Particularly, replete number of investigations have been put forward that has associated SNPs of candidate genes with economically important traits such as carcass weight (CW), longissimus muscle area (LMA), backfat thickness (BFT) and marbling score (MS) in beef cattle. Bovine genome sequencing and HapMap projects have provided, millions of SNPs in the cattle genome. However, till date studies related to the association of the SNPs with economic traits in beef cattles are meager. Discovering of SNPs bovine whole genome would certainly be useful genetic assets for the development of SNP marker for economically important traits in beef cattle.
참고문헌 (57)
- Alexander, L. J., "A Limousin specific myostatin allele affects longissimus muscle area and fatty adci profiles in a Wagyu-Limousin F 2 population", J. Anim. Sci, 87, pp.1576~1581 (2009)
- Barendse, W., "The Effect of genetic variation of the retinoic acid receptor-related orphan receptor C gene on fatness in cattle", Genet, 175, pp.843~853 (2007)
- Barendse, W., "The effect of variation at the retinoic acid receptor-related orphan receptor C gene on intramuscular fat percent and marbling score in Australian cattle", J. Anim. Sci, 88(1), pp.47~51 (2010)
- Bell, J. L., "Single nucleotide polymorphism and disease gene mapping", Arthritis Research, 4, pp.S273~S278 (2002)
- Bhuiyan, M. S. A., "Identification of SNPs in MYOD gene family and their associations with carcass traits in cattle", Livest. Sci, 126(1), pp.292~297 (2009)
- Casas, E., "Assessment of single nucleotide polymorphisms in genes residing on chromosomes 14 and 29 for association with carcass composition traits in Bos indicus cattle", J. Anim. Sci, 83, pp.13~19 (2005)
- Cheong, H. S., "A single nucleotide polymorphism in CAPN1 associated with marbling score in Korean cattle", BMC Genet, 19(9), pp.33~ (2008)
- Deobald, H. M., "Characterization of two pro-opiomelanocortin gene variants and their effects on carcass traits in beef cattle", BMC Genet, 12(2) (2011)
- Eck, S. H., "Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery", Geno. Biol, 10, pp.R82~ (2009)
- Elsik, C. G., "The genome sequence of taurine cattle: a window to ruminant biology and evolution", Sci, 324, pp.522~528 (2009)
- Gan, Q. F., "Association analysis of thyroglobulin gene variants with carcass and meat quality traits in beef cattle", J. Appl. Genet, 49(3), pp.251~255 (2008)
- Gibbs, R. A., "Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds", Sci, 324, pp.528~532 (2009)
- Goodall, J. J., "IGF2 gene characterization and association with rid eye area in beef cattle", Ani. Genet, 38, pp.154~161 (2007)
- 허강녕, "한우 l4번 염색체 QTL 영역내 Fatty acid binding protein 5 유전자의 다형성과 도체 및 육질 형질과의 관련성 분석", 한국동물자원과학회지, 53(4), pp.311~317 (2011), 한국동물자원과학회
- 홍민욱, "한우에서 Myopalladin (MYPN) 유전자의 A1795G SNP의 다형성 및 도체형질 관련성 분석", 동물자원연구, 22(2), pp.77~83 (2011), 동물자원공동연구소
- Hou, G. Y., "Genetic polymorphisms of the CACNA2D1 gene and their association with carcass and meat quality traits in cattle", Bioch. Genet, 48, pp.751~759 (2010)
- Huang, M., "Polymorphisms in MC4R gene and correlations with economic traits in cattle", Mol. Biol. Rep, 37, pp.3941~3944 (2010)
- Jiao, Y., "A novel polymorphism of the MYPN gene and its association with meat quality traits in Bos taurus", Genet. & Mol. Res, 9(3), pp.1751~1758 (2010)
- Jiao, Y., "Molecular characterization, polymorphism of the ACOX1 gene and association with ultrasound traits in Bos taurus", Genet. Mol. Res, 10(3), pp.1948~1957 (2011)
- Kim, B. S., "Association between the polymorphism of the nephroblastoma overexpressd and exostosin-1 genes within BTA 14 QTL region and economic traits in Hanwoo", 석사, pp.2009
- 김대현, "한우에서 Cattle QTLdb와 BcSNPdb를 이용한 육질연관 후보 SNP 발굴", 한국동물자원과학회지, 50(6), pp.775~782 (2008), 한국동물자원과학회
- 김남국, "한우 Inositol 1,4,5-triphosphate Receptor Type 1(IP3R1) 유전자의 다형성 및 형질 관련성 분석", 한국동물자원과학회지, 51(4), pp.289~294 (2009), 한국동물자원과학회
- 김상욱, "한우 Fatty Acid Synthase(FASN) 유전자 반수체형의 후대검정우 육량 및 육질에 미치는 영향", 한국동물자원과학회지, 52(1), pp.9~16 (2010), 한국동물자원과학회
- Kim, Y., "Genome-wide association study reveals five nucleotide sequence variants for carcass traits in beef cattle", Ani. Genet, 32, pp.361~365 (2011)
- Lee, J. A., "Identification of a SNP in Hanwoo CAPN1 and CAST gene with its effect on economic traits", 석사, pp.2010
- 이제영, "Multifactor Dimensionality Reduction(MDR)을 이용한 한우 도체중에서의 주요 SNP 규명", 응용통계연구, 21(1), pp.53~63 (2008), 한국통계학회
- Lee, S. H., "Genetic polymorphisms of the bovine Fatty acid binding protein 4 gene are significantly associated with marbling and carcass weight in Hanwoo (Korean Cattle)", Anim. Genet, 41, pp.442~444 (2010)
- Liu, H., "Mutations of MC4R gene and its association with economic traits in Qinchuan cattle", Mol. Bio. Rep, 37(1), pp.535~540 (2010)
- Li, X., "Association of polymorphisms at DGAT1, leptin, SCD1, CAPN1 and CAST genes with color, marbling and water holding capacity in meat from beef cattle populations in Sweden", Meat Sci, 94, pp.153~158 (2013)
- Marques, E., "Polymorphisms in positional candidate genes on BTA14 and BTA26 affect carcass quality in beef cattle", J. Anim. Sci, 87(8), pp.2475~2484 (2009)
- Michal, J. J., "The bovine fatty acid binding protein 4 gene is significantly associated with marbling and subcutaneous fat depth in Wagyu x Limousin F2 crosses", Anim. Genet, 37, pp.400~402 (2006)
- Morsci, N. S., "Association analysis of adiponectin and somatostatin polymorphisms on BTA1 with growth and carcass traits in Angus cattle", Anim. Genet, 37(6), pp.554~562 (2008)
- Nkrumah, J. D., "Polymorphisms in the bovine leptin promoter associated with serum leptin concentration, growth, feed intake, feeding behavior, and measures of carcass merit", J. Anim. Sci, 83(1), pp.20~28 (2005)
- 박지애, "한우 ADSF", resistin 유전자의 단일 염기 다형과 육질관련형질 상관 분석, 2007, pp.49(5), 577~584[DOI]
- 박새롬, "PCR-RFLP를 이용한 한우 Stearoyl-CoA Desaturase-1(SCD1)유전자의 SNP 및 경제형질 관련성 분석", 동물자원연구, 23(1), pp.1~7 (2012), 동물자원공동연구소
- Rempel, L. A., "Relationship of polymorphisms within metabolic genes and carcass traits in crossbred beef cattle", J. Anim. Sci, 90, pp.1311~1316 (2011)
- Rincon, G., "Polymorphisms in the STAT6 gene and their association with carcass traits in feedlot cattle", Anim. Genet, 40(6), pp.878~882 (2009)
- Sasaki, S., "Association of a single nucleotide polymorphism in akirin 2 gene with marbling in Japanese Black beef cattle", BMC. Res. Notes, 2, pp.131~ (2009)
- Schoonover, C. O., "A photographic grid used to measure rib eye areas", J. Anim. Sci, 16, pp.957~960 (1957)
- Seong, J. Y., "Identification and analysis of MC4R polymorphisms and their association with economic traits of Korean cattle (Hanwoo)", Mol. Biol. Rep, 39, pp.3597~3601 (2011)
- Sherman, E. L., "Polymorphisms and haplotypes in the bovine neuropeptide Y, growth hormone receptor, ghrelin, insulin-like growth factor 2, and uncoupling proteins 2 and 3 genes and their associations with measures of growth, performance, feed efficiency, and carcass merit in beef cattle", J. Anim. Sci, 86(1), pp.1~16 (2008)
- Shin S. C., "The development of DNA markers related to carcass and meat quality traits in kroean cattle", 석사, pp.2006
- S.C. Shin, "Association of SNP Marker in the Leptin Gene with Carcass and Meat Quality Traits in Korean Cattle", ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 20(1), pp.1~6 (2007), 아세아·태평양축산학회
- S.C. Shin, "SNP Detection of Carboxypeptidase E Gene and Its Association with Meat Quality and Carcass Traits in Korean Cattle", ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 20(3), pp.328~333 (2007), 아세아·태평양축산학회
- S.C. Shin, "Identification of a Novel SNP Associated with Meat Quality in C", EBPα Gene of Korean Cattle, 2007, pp.20(4), 466~470[DOI]
- S.C. Shin, "Association of SNP Marker in the Thyroglobulin Gene with Carcass and Meat Quality Traits in Korean Cattle", ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 20(2), pp.172~177 (2007), 아세아·태평양축산학회
- 신현수, "한우에서의 SNP 연구현황", 동물자원연구, 19, pp.1~10 (2008), 동물자원공동연구소
- Stothard, P., "Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery", BMC Geno, 12, pp.559~ (2011)
- Ujan, J. A., "Back fat thickness and meat tenderness are associated with a 526 T->A mutation in the exon 1 promoter region of the MyF-5 gene in Chinese Bos taurus", Genet. Mole. Res, 10(7), pp.3070~3079 (2011)
- Van Tassell, C. P., "SNP discovery and allele frequency estimation by deep sequencing of reducedrepresentation libraries", Nat. Methods, 5, pp.247~252 (2008)
- Wang, Z., "SNPs, Protein structure, and disease", Hum. Mutat, 17, pp.263~270 (2001)
- Wibowo, T. A., "Corticotropin releasing hormone is a promising candidate gene for marbling and subcutaneous fat depth in beef cattle", Geno, 50(10), pp.939~945 (2007)
- Yamada, T., "Association of single nucleotide polymorphisms in the endothelial differentiation sphingolipid G-protein-coupled receptor 1 gene with marbling in Japanese black beef cattle", Anim. Genet, 40, pp.209~216 (2008)
- Yamada, T., "Novel SNP in 5' flanking region of EDG1 associated with marbling in Japanese Black beef cattle", J. Anim. Sci, 80(4), pp.486~489 (2009)
- Yamada, T., "Association of a single nucleotide polymorphism in ribosomal protein L27a gene with marbling in Japanese Black beef cattle", J. Anim. Sci, 80(6), pp.631~635 (2009)
- Yamada, T., "Association of a single nucleotide polymorphism in titin gene with marbling in Japanese Black beef cattle", BMC. Res. Notes, 2(78) (2009)
- Yuan, Z. R., "Novel SNPs of the bovine CACNA2D1 gene and their association with carcass and meat quality traits", Mol. Biol. Rep, 38, pp.365~370 (2011)
