QTLs for Domestication-related and Agronomic Traits in Temperate Japonica Weedy Rice
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Abstract
This study was conducted to identify the genetic basis of the domestication-related traits in weedy rice. An RIL population consisting of 80 lines was developed from a cross between the japonica weedy rice, Hapcheonaengmi 3 and the Tongil-type cultivar Milyang 23. The population was genotyped with 132 DNA markers, providing an average interval size of 11.0cM, and also evaluated for 20 traits related to domestication and agricultural performance. A total of 48 QTLs and two loci associated with qualitative variation for pericarp and base coloration were identified using single point and interval analysis. The number of QTLs per trait ranged from one to six. These 48 QTLs were located in27 intervals distributed on 11 chromosomes except for chromosome 12. The results indicated that most domestication-related traits clustered in chromosomal blocks, and the positions of many of these clusters were consistent with those reported in previous studies. Phenotypic variation associated with each QTL ranged from 7.5 to 31.9%. For 10 (40%) of the QTLs identified for agricultural performance in this study, the Hapcheonaengmi 3-derived allele contributed a desirable agronomic effect despite the overall undesirable characteristics of the weedy phenotype. Favorable wild alleles were detected for days to heading, panicle exsertion, primary branch number, and leaf discoloration related with cold tolerance. When compared with previous studies involving interspecific crosses, it can be concluded that weedy rice is useful as a source of valuable alleles for rice improvement.
참고문헌 (24)
- "Development of introgression lines of weedy rice in the background of Tongil-type rice", 19, pp.14~15 (2002)
- "Heredity and genetic mapping of domestication-related traits in a temperate japonica weedy rice", 102, pp.118~126 (2001)
- "Genomic regions affecting seed shattering and seed dormancy in rice", 100, pp.840~846 (2000)
- "Saturated molecular map of the rice genome based on an interspecific backcross population", pp.1251~138 1274 (1994)
- "Genetics characteristics of Korean weedy rice", 86, pp.103~110 (1995), Euphytica
- "American Society of Agronomy"
- "Diverse variation of reproductive barriers in three intraspecific rice crosses", 160(m), pp.313~322 (2002)
- "Report of committee on gene symbolization, nomenclature and linkage groups", 12, pp.9~153 (1995)
- "QTL mapping in rice. Trends Genet", 11, pp.482~487 (1995)
- "Development and mapping of 2240 new SSR markers for rice", 9(m), pp.199~207 (2002)
- "Mapping quantitative loci controlling seed longevity in rice", 104, pp.981~986 (2002)
- "QGene manual. Electonic address: greengenes. cit. cornell. edu port 70; directory "Software for genetics", QGene"., 1997, ~
- "Mapping of genetic factors controlling domestication-related traitsusing an RILs population from a cross between a Korean weedy rice and Tongiltype" (2004), MS Thesis Department of Agronomy Graduate School of Chungnam National Unversity.
- "Indica-Japonica differentiation of rice cultivars 141-179 in Origin of Cultivated Rice"
- "Development of microsatellite markers and characterization of simple sequence length polymorphism in rice", 252, pp.597~607 (1996)
- "QTL analysis of low temperature germinability in a weedy rice", 31(3), pp.261~267 (1999)
- "Character variations of Korean weedy rice", pp.69~72
- "Genetic characterization of weedy rice based on morpho-physiology", 94, pp.316~321 (1997), isozymes and RAPD markers
- "McCouch SR 2000 Mapping and genome organization of microsatellite sequences in rice", 100, pp.697~712 (2000)
- "Computational and experimental analysis of microsatellites in rice", 11, pp.1441~1452 (2001)
- "Diversity in the Oryza genus", 6, pp.139~146 (2003)
- "Identification of genetic factors controlling domestication-related traits of rice using an F2 population of a cross between Oryza sativa and O", 98, pp.243~251 (1999)
- "Chromosomal regions associated with segregation distortion of molecular markers in F2 and recom- binant inbred populations in rice", 253, pp.535~545 (1997)
- "Mapping and sequencing rice telomeres", (48) (2003), XI Conference, San Diego, Poster
