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Wide-line NMR and DSC studies on intrinsically disordered p53 transactivation domain and its helically pre-structured segment

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초록

Wide-line 1H NMR intensity and differential scanning calorimetry measurements were carried out on the intrinsically disordered 73-residue full transactivation domain (TAD) of the p53 tumor suppressor protein and two peptides: one a wild type p53 TAD peptide with a helix pre-structuring property, and a mutant peptide with a disabled helix-forming propensity. Measurements were carried out in order to characterize their water and ion binding characteristics. By quantifying the number of hydrate water molecules, we provide a microscopic description for the interactions of water with a wild-type p53 TAD and two p53 TAD peptides. The results provide direct evidence that intrinsically disordered proteins (IDPs) and a less structured peptide not only have a higher hydration capacity than globular proteins, but are also able to bind a larger amount of charged solute ions.

Abstract

Wide-line 1H NMR intensity and differential scanning calorimetry measurements were carried out on the intrinsically disordered 73-residue full transactivation domain (TAD) of the p53 tumor suppressor protein and two peptides: one a wild type p53 TAD peptide with a helix pre-structuring property, and a mutant peptide with a disabled helix-forming propensity. Measurements were carried out in order to characterize their water and ion binding characteristics. By quantifying the number of hydrate water molecules, we provide a microscopic description for the interactions of water with a wild-type p53 TAD and two p53 TAD peptides. The results provide direct evidence that intrinsically disordered proteins (IDPs) and a less structured peptide not only have a higher hydration capacity than globular proteins, but are also able to bind a larger amount of charged solute ions.

참고문헌 (18)

  1. Lee SH, "Understanding pre-structured motifs(PreSMos)in intrinsically unfolded proteins", Curr Protein Pept Sci, 13, pp.34~54 (2012)
  2. Dunker AK, "Intrinsically disordered protein", J Mol Graph Model, 19, pp.26~59 (2001)
  3. Uversky VN, "Intrinsically disordered proteins in human diseases: Introducing the D2 concept", Annu Rev Biophys, 37, pp.215~246 (2008)
  4. Dunker AK, "Intrinsic protein disorder in complete genomes", Genome Inform, 11, pp.161~171 (2000)
  5. Obradovic Z, "Exploiting heterogeneous sequence properties improves prediction of protein disorder", PROTEINS:Structure, Function, and Bioinformatics, (Suppl 7), pp.176~182 (2005)
  6. Bax A, "Methodological advances in protein NMR", Acc Chem Res, 26, pp.131~138 (1993)
  7. Clore G, "Structures of larger proteins in solution: Three- and four-dimensional heteronuclear NMR spectroscopy", Science, 252, pp.1390~1399 (1991)
  8. Lee H, "Local structural elements in the mostly unstructured transcriptional activation domain of human p53", J Biol Chem, 275, pp.29426~29432 (2000)
  9. Fuxreiter M, "Preformed structural elements feature in partner recognition by intrinsically unstructured proteins", J Mol Biol, 338, pp.1015~1026 (2004)
  10. Tompa K, "Interfacial water at protein surfaces:wide-line NMR and DSC characterization of hydration in ubiquitin solutions", Biophys J, 96, pp.2789~2798 (2009)
  11. Hazy E, "Distinct hydration properties of wild-type and familial point mutant A53T of alpha-Synuclein associated with Parkinson's disease", Biophys J, 101, pp.2260~2266 (2011)
  12. Tompa K, "Wide-line NMR and protein hydration in intrinsically disordered protein analysis", pp.167~196 (2012), Humana Press
  13. Coke R, "The properties of water in biological systems", Annu Rev Biophys Bioeng, 3, pp.95~126 (1974)
  14. Tompa K, "instrumental analysis of intrinsically disordered proteins:assessing structure and conformation", pp.345~368 (2010), John Wiley & Sons Inc
  15. Kamasa P, "DSC approach for the investigation of mobile water fractions in aqueous solutions of NaCl and Tris buffer", Thermochimica Acta, 464, pp.29~34 (2007)
  16. Tompa K, "Interfacial water at protein surfaces:wide-line NMR and DSC characterization of hydration in ubiquitin solutions", Biophys J, 96, pp.2789~2798 (2009)
  17. Tompa P, "Protein-water and protein- buffer interactions in the aqueous solution of an intrinsically unstructured plant dehydrin: NMR intensity and DSC aspects", Biophys J, 91, pp.2243~2249 (2006)
  18. Tompa K, "Rotation barriers on protein molecular surfaces", Chem Phys, 448, pp.15~25 (2015)

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