First report on the morphological traits of Cociella crocodilus larva identified through amplicon sequencing

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참고문헌 (41)

1. Akimoto S, "Identification of alfonsino and related fish species belonging to the genus Beryx with mitochondrial 16S rRNA gene and its application on their pelagic eggs", Fish. Sci, 68, pp.1242~1249 (2002)[DOI]
2. Alshari NFMAH, "Metabarcoding of fish larvae in the Merbok River reveals species diversity and distribution along its mangrove environment", Zool. Stud, 60 (2021)[DOI]
3. "Amplicon PCR, Clean-Up PCR and Index PCR. 16S Metagenomic Sequencing Library Preparation" (2013)[URL]
4. Aoyama J, "Distribution and dispersal of anguillid leptocephali in the western Pacific Ocean revealed by molecular analysis", Mar. Ecol. -Prog. Ser, 188, pp.193~200 (1999)[DOI]
5. Bolyen E, "Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2", Nat. Biotechnol, 37, pp.852~857 (2019)[DOI]
6. Bucklin A, "New insights into biodiversity, biogeography, ecology, and evolution of marine zooplankton based on molecular approaches", ICES J. Mar. Sci, 78, pp.3281~3287 (2021)[DOI]
7. Choi HK, "Investigation of fish community structure and species diversity in two river estuary ecosystems, the Taehwa River and Changwon Stream, based on conventional survey and eDNA metabarcoding", Korean J. Environ. Biol, 41, pp.637~656 (2023)[DOI]
8. Choi HY, "Ectopleura crocea (Cnidaria: Hydrozoa) Identified as a predator of pelagic fish eggs through Cytochrome c Oxidase I metabarcoding", J. Mar. Sci. Eng, 11, pp.2178~ (2023)[DOI]
9. Choi HY, "Evidence of intrusion of a rare species, Peristedion liorhynchus, into Korean waters based on high-throughput sequencing of the mixed fish eggs", Korean J. Ichthyol, 34, pp.8~15 (2022)[DOI]
10. Choi JH, "Evaluating zooplankton species diversity using environmental DNA and bulk-DNA metabarcoding in the Ulleung Basin of the Southeastern Korean Peninsula in the summer", Front. Mar. Sci, 11, pp.1351148~ (2024)[DOI]
11. Clark K, "GenBank", Nucleic Acids Res, 44, pp.D67~D72 (2016)[DOI]
12. Duke EM, "Efficacy of metabarcoding for identification of fish eggs evaluated with mock communities", Ecol. Evol, 10, pp.3463~3476 (2020)[DOI]
13. "Eschmeyer’s catalog of fishes: Genera, species, references" (2024)[URL]
14. Geller J, "Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys", Mol. Ecol. Resour, 13, pp.851~861 (2013)[DOI]
15. Johnson M, "NCBI BLAST: A better web interface", Nucleic Acids Res, 36, pp.W5~W9 (2008)[DOI]
16. Kendall Jr AW, "Ontogeny and Systematics of Fishes", pp.11~22 (1984), Allen Press Inc
17. Kim BJ, "Identification of Albula sp. (Albulidae: Albuliformes) leptocephalus collected from the southern coastal waters of Korea using cytochrome b DNA sequences", Ocean Sci. J, 43, pp.101~106 (2008)[DOI]
18. Kim G, "Comparison of morphological analysis and DNA metabarcoding of crustacean mesozooplankton in the Yellow Sea", Ocean Polar Res, 43, pp.45~51 (2021)[DOI]
19. Kim S, "Evidence of the intrusion of the oceanic lightfish (Vinciguerria nimbaria) into Korean waters based on high-throughput sequencing of mixed fish eggs", J. Mar. Sci. Eng, 11, pp.257~ (2023)[DOI]
20. Kim S, "Genetic similarity between the South Atlantic and the western North Pacific Maurolicus (Stomiiformes: Actinopterygii) taxa, M. walvisensis Parin & Kobyliansky and M. japonicus Ishikawa: evidence for synonymy?", J. Fish Biol, 72, pp.1202~1214 (2008)[DOI]
21. Kimmerling N, "Quantitative species-level ecology of reef fish larvae via metabarcoding", Nat. Eol. E, 2, pp.306~316 (2018)[DOI]
22. Ko HL, "Evaluating the accuracy of morphological identification of larval fishes by applying DNA barcoding", PLoS One, 8, pp.e53451~ (2013)[DOI]
23. Leis JM, "The Larvae of Indo-Pacific Coastal Fishes: An Identification Guide to Marine Fish Larvae. Vol. 2" (2000), Brill
24. Leray M, "A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: Application for characterizing coral reef fish gut contents", Front. Zool, 10, pp.1~14 (2013)[DOI]
25. Nei M, "Molecular Evolution and Phylogenetics" (2000), Oxford University Press
26. Okiyama M, "An Atlas of the Early Stage Fishes in Japan" (2014), Tokai Univ. Press
27. Park HJ, "Temporal variation in the community structure of green tide forming macroalgae (Chlorophyta; genus Ulva) on the coast of Jeju Island, Korea based on DNA barcoding", Korean J. Environ. Biol, 40, pp.464~476 (2022)[DOI]
28. Ratcliffe FC, "Quantitative assessment of fish larvae community composition in spawning areas using metabarcoding of bulk samples", Ecol. Appl, 31, pp.e02284~ (2021)[DOI]
29. Richards WJ, "Early stages of Atlantic fishes: An Identification Guide for the Western Central North Atlantic. Vol. 1" (2005), Taylor & Francis
30. Rodríguez-Graña L, "Divergence of two forms of Triphoturus in the eastern Pacific based on mtDNA cytochrome b gene sequences and larval morphology", J. Fish Biol, 64, pp.1455~1461 (2004)[DOI]
31. Schloss PD, "Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities", Appl. Environ. Microbiol, 75, pp.7537~7541 (2009)[DOI]
32. Song CU, "Do red tide events promote an increase in zooplankton biodiversity?", Environ. Pollut, 2024, pp.124880~ (2024)[DOI]
33. Song CU, "Zooplankton diversity monitoring strategy for the urban coastal region using metabarcoding analysis", Sci. Rep, 11, pp.24339~ (2021)[DOI]
34. Song JY, "Nextgeneration sequencing for environmental biology-full-fledged environmental genomics around the corner", Korean J. Environ. Biol, 30, pp.77~89 (2012)
35. Tamura K, "MEGA11: Molecular evolutionary genetics analysis version 11", Mol. Biol. Evol, 38, pp.3022~3027 (2021)[DOI]
36. Thompson JD, "CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice", Nucleic Acids Res, 22, pp.4673~4680 (1994)[DOI]
37. Wang Z, "VertU: Universal multilocus primer sets for eDNA metabarcoding of vertebrate diversity, evaluated by both artificial and natural cases", Front. Ecol. Evol, 11, pp.1164206~ (2023)[DOI]
38. Ward RD, "DNA barcoding Australia's fish species", Philos. Trans. R. Soc. Lond. B -Biol. Sci, 360, pp.1847~1857 (2005)[DOI]
39. Yeh HD, "Metabarcoding analysis of regional variation in gut contents of the copepod Calanus finmarchicus in the North Atlantic Ocean", Deep-Sea Res. II: Top. Stud. Oceanogr, 180, pp.104738~ (2020)[DOI]
40. Yoon CH, "Pisces of Korea" (2022), Academic Information Center
41. Zhao R, "Whole genome survey and genetic markers development of crocodile flathead Cociella crocodilus", Anim. Genet, 52, pp.891~895 (2021)[DOI]

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