Ultrastructural and Molecular Characterization of <i>Surirella atomus</i> Hustedt 1955 (Bacillariophyta, Surirellalceae), A Newly Recorded Species in Korea
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Surirella atomus Hustedt 1955, surirelloid diatom, were obtained from Hampyeong Bay, Mu-an, in the west coast of Korea. We describe the first record of S. atomus in Korea and report its ultrastructure and molecular characteristics for the first time. For molecular analysis, rbcL gene and cob gene were sequenced. This species is very small in size, making it difficult to observe its morphological features under a light microscope. Even with a scanning electron microscope, it has no unique structure in the valve. It is morphologically very simple. This rare species was known as a marine benthic species. However, it appears to be widely distributed in marine, freshwater, and brackish environments according to the literature documenting this species. In terms of phylogeny, S. atomus has been tentatively linked to Petrodictyon gemma, but the phylogenetic placement of S. atomus seems to be still uncertain, in a manner that is similar to S. febigeri. However, morphological observations derived from this study suggest that this species belongs to the genus Surirella.
Abstract
Surirella atomus Hustedt 1955, surirelloid diatom, were obtained from Hampyeong Bay, Mu-an, in the west coast of Korea. We describe the first record of S. atomus in Korea and report its ultrastructure and molecular characteristics for the first time. For molecular analysis, rbcL gene and cob gene were sequenced. This species is very small in size, making it difficult to observe its morphological features under a light microscope. Even with a scanning electron microscope, it has no unique structure in the valve. It is morphologically very simple. This rare species was known as a marine benthic species. However, it appears to be widely distributed in marine, freshwater, and brackish environments according to the literature documenting this species. In terms of phylogeny, S. atomus has been tentatively linked to Petrodictyon gemma, but the phylogenetic placement of S. atomus seems to be still uncertain, in a manner that is similar to S. febigeri. However, morphological observations derived from this study suggest that this species belongs to the genus Surirella.
참고문헌 (35)
- Akogbeto HK, "Degré d’eutrophisation et diversité phytoplanctoni que de la lagune de Porto-Novo, République du Bénin", Afr Sci, 14(3), pp.42~57 (2018)
- An SM, "Identification of benthic diatoms isolated from the eastern tidal flats of the Yellow Sea: comparison between morphological and molecular approaches", PLoS ONE, 12, pp.e0179422~ (2017)
- Bahls LL, "A checklist of diatoms from inland waters of the northwestern United States", P Acad Nat Sci Phila, 158(1), pp.1~35 (2009)
- Barillé L, "Photosynthetic epibionts and endobionts of Pacific oyster shells from oyster reefs in rocky versus mudflat shores", PloS ONE, 12(9), pp.e0185187~ (2017)
- Benthic diatoms in the rivers and estuaries of South Africa, "Bate GC", Water Research Commission, 175~, pp.WRC Report No. TT 234 (2004), 04
- Bramburger AJ, "An examination of species within the genus Surirella from the Malili Lakes, Sulawesi Island, Indonesia, with descriptions of 11 new taxa", Diatom Res, 21(1), pp.1~56 (2006)
- Chessman BC, "Artificial-substratum periphyton and water quality in the lower La Trobe River, Victoria", Aust J Mar Fresh Res, 36(6), pp.855~871 (1985)
- Daugbjerg N, "A Molecular phylogeny of the heterokont algae based on analyses of chloroplastencoded rbcL sequence data", J Phycol, 33(6), pp.1031~1041 (1997)
- Denys L, "A checklist of the diatoms in the Holocene deposits of the western Belgian coastal plain with a survey of their apparent ecological requirements", Belgische Geologische Dienst, 41~ (1991)
- "Surirella atomus. Diatoms of North America" (2011)[URL]
- "Algaebase" (2011)[URL]
- Hustedt F, "Marine littoral diatoms of Beaufort, North Carolina", Mar Station Bull, 6, pp.1~67 (1955)
- Jahn R, "Differentiating Iconella from Surirella (Bacillariophyceae): typifying four Ehrenberg names and a preliminary checklist of the African taxa", PhytoKeys, 82, pp.73~112 (2017)
- Kaleli A, "Biodiversity of carapace epibiont diatoms in loggerhead sea turtles (Caretta caretta Linnaeus 1758) in the Aegean Sea Turkish coast", PeerJ, 8, pp.e9406~ (2020)
- 2,2. Teil: Bacillariaceae, Epithemiaceae, Surirellaceae, "SüDwasserflora von Mitteleuropa, Bacillariophyceae, Band 2", pp.1999, Krammer K
- Krayesky DM, "Gulf of Mexico origin, waters, and biota", pp.155~186 (2009), Texas A&M University Press, College Station
- Ludwig W, "ARB: a software environment for sequence data", Nucleic Acids Res, 32(4), pp.1363~1371 (2004)
- Maples RS, "Community structure of diatoms epiphytic on pneumatophores of the black mangrove, Avicennia germinans, in a Louisiana salt marsh", Gulf Caribb Res, 7(3), pp.255~259 (1983)
- Morais KSD, "Taxonomy and ecology of order Surirellales (Bacillariophyceae) in tropical reservoirs in Southeastern of Brazil", Acta Limnol Bras, 30, pp.e204~ (2018)
- "National list of species of Korea" (2020)[URL]
- "National list of marine species" (2021)[URL]
- Nikolajev-Wikström L, "Turve-ja metsätalouden vaikutukset kahden metsäjärven ekosysteemiin: paleolimnologinen piileväanalyysi", MS, pp.2015
- O'Neil PE, "Alabama coastal region ecological characterization:a synthesis of environmental data (Vol. 2)", pp.346~ (1982), Bureau of Land Management, Fish and Wildlife Service
- O'Sullivan PE, "The lakes handbook. Vol. 1. Limnology and limnetic ecology", pp.708~ (2004), Wiley-Blackwell
- Qi H, "Seasonal shift in community pattern of planktonic diatoms and environmental drivers in Jiaozhou Bay, northern China", J Mar Biol Assoc UK, 96(3), pp.715~723 (2016)
- Ronquist F, "MrBayes 3: Bayesian phylogenetic inference under mixed models", Bioinformatics, 19(12), pp.1572~1574 (2003)
- Ruck EC, "Preliminary phylogeny of the Family Surirellaceae (Bacillariophyta)", J Cramer, Berlin, pp.236~ (2004)
- Ruck EC, "Phylogeny, ecology, morphological evolution, and reclassification of the diatom orders Surirellales and Rhopalodiales", Mol Phylogenet Evol, 103, pp.155~171 (2016)
- Stamatakis A, "RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies", Bioinformatics, 30, pp.1312~1313 (2014)
- Sullivan MJ, "Similarity of an epiphytic and edaphic diatom community associated with Spartina alterniflora", T Am Microsc Soc, 101(1), pp.84~90 (1982)
- Trobajo R, "A rapid cleaning method for diatoms", Diatom Res, 34(2), pp.115~124 (2019)
- Turpin PJF, "Observations sur le nouveau genre Surirella", Mém Mus natl hist nat, 16, pp.361~368 (1828)
- Van Landingham SL, "Catalogue of the fossil and recent genera and species of diatoms and their synonyms: part VII: Rhoicosphenia through Zygoceros", J Cramer, Lehre, pp.635~ (1978)
- Veselá J, "Surirella terryi and S. cruciata: two rare diatoms from North America", Diatom Res, 28(4), pp.503~516 (2013)
- Vieira S, "Effects of short-term changes in sediment temperature on the photosynthesis of two intertidal microphytobenthos communities", Estuar Coast Shelf S, 119, pp.112~118 (2013)