본문 바로가기
KERD
논문KCI 등재

Cloning and Characterization of Cellulase Gene (cel5B) from Cow Rumen Metagenome

2

조회

0

다운로드

1

인용

0

참고문헌

키워드

초록

A carboxymethyl cellulase gene, cel5B, was cloned, sequenced, and expressed in Escherichia coli. pRCS20 in E. coli was identified from metagenomic cosmid library of cow rumen for cellulase activity on a carboxymethyl cellulose agar plates. Cosmid clone (RCS20) was partially digested with Sau3AI, ligated into BamHI site of pBluescript II SK+ vector, and transformed into E. coli DH5α. The insert DNA of 1.3 kb was obtained, designated cel5B, which has the activity of hydrolyzation of CMC. The cel5B gene had an open reading frame (ORF) of 1,059 bp encoding 352 amino acids with a signal peptide of 48 amino acids and the conserved region, VIYEIYNEPL, belongs to the glycosyl hydrolase family 5. The molecular mass of Cel5B protein expressed from E. coli DH5α exhibited to be about 34 kDa by CMC-SDS-PAGE. The optimal pH was 8.0, and the optimal temperature was about 50℃ for its enzymatic activity.

Abstract

A carboxymethyl cellulase gene, cel5B, was cloned, sequenced, and expressed in Escherichia coli. pRCS20 in E. coli was identified from metagenomic cosmid library of cow rumen for cellulase activity on a carboxymethyl cellulose agar plates. Cosmid clone (RCS20) was partially digested with Sau3AI, ligated into BamHI site of pBluescript II SK+ vector, and transformed into E. coli DH5α. The insert DNA of 1.3 kb was obtained, designated cel5B, which has the activity of hydrolyzation of CMC. The cel5B gene had an open reading frame (ORF) of 1,059 bp encoding 352 amino acids with a signal peptide of 48 amino acids and the conserved region, VIYEIYNEPL, belongs to the glycosyl hydrolase family 5. The molecular mass of Cel5B protein expressed from E. coli DH5α exhibited to be about 34 kDa by CMC-SDS-PAGE. The optimal pH was 8.0, and the optimal temperature was about 50℃ for its enzymatic activity.

참고문헌 (30)

  1. Alrenbuchner, J, "A new λRES vector with a built-in Tn 1721-encoded excision system", Gene, 123, pp.63~68 (1993)
  2. Berger, E, "Cloning and sequencing of an endoglucanase (end1) gene from Butyrivibrio fibrisolvens H17c", Mol. Gen. Genet, 219, pp.193~198 (1989)
  3. Birsan, C, "Mechanisms of cellulases and xylanases", Biochem. Soc. Trans, 26, pp.156~160 (1998)
  4. CHO, SOO JEONG, "16S rDNA Analysis of Bacterial Diversity in Three Fractions of Cow Rumen", Journal of Microbiology and Biotechnology, 16(1), pp.92~101 (2006), 한국미생물·생명공학회
  5. Dehority, B. A, "Development of, and natural fluctuation in, rumen microbial populations, In The Rumen Microbial Ecosystem", pp.196~245 (1997), Chapman & Hall
  6. Ferrer, M, "Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora", Environ Microbiol, 7, pp.1996~2010 (2005)
  7. Fields, M. W, "The role of ruminal carboxymethyl cellulases in the degradation of β-glucans from cereal grain", FEMS Microbiol. Ecol, 27, pp.261~268 (1998)
  8. Short protocols in molecular biology, "Frederick, M. A", 2~13 (1999)
  9. Hardy, K. G, "Purification of bacterial plasmid", pp.1~6 (1987), Plasmid IRL Press
  10. Henrissat, B, "A scheme for designating enzymes that hydrolyse the polysaccharides in the cell walls of plants", FEBS Lett, 425, pp.352~354 (1998)
  11. Hristov, A. N, "Stability of exogenous polysaccharide-degrading enzymes in the rumen", Anim. Feed. Sci. Technol, 76, pp.161~168 (1998)
  12. Hristov, A. N, "Effect of dietary or abomasal supplementation of exogenous polysaccharide-degrading enzymes on rumen fermentation and nutrient digestibility", J. Anim. Sci, 76, pp.3146~3156 (1998)
  13. Hungate, R. E, "The rumen and its microbe" (1966), Academic Press
  14. Kudo, H, "Electron microscopic study of the methyl cellulosemediated detachment of cellulolytic rumen bacteria from cellulose fibers", Can. J. Microbiol, 33, pp.267~272 (1987)
  15. Kuriki, R, "New type of pullulanase from Bacillus strearothermophilus and molecular cloning and expression of the gene in Bacillus subtilis", J. Bacteriol, 170, pp.1554~1559 (1988)
  16. Lam, T. B. T, "Primary and secondary walls of grasses and other forage plants: taxonomic and structural considerations, In Microbial and Plant Opportunities to Improve Lignocellulose Utilization by Ruminants", pp.43~69 (1990), Elsevier Science Publishers
  17. Lee, R. L, "Microbial cellulose utilization: fundamentals and biotechnology", Microbiol. Mol. Biol. Rev, 66, pp.739~ (2002)
  18. Lim, W. J, "Cloning and characterization of an intracellular isoamylase gene from Pectobacterium chrysanthemi PY35. Biochem", Biophys. Res. Commun, 287, pp.348~354 (2001)
  19. McNeil, M, "Structure and function of the primary cell wall of plants", Ann. Rev. Biochem, 53, pp.625~663 (1984)
  20. Miron, J, "Invited review: adhesion mechanisms of rumen cellulolytic bacteria", J. Dairy. Sci, 84, pp.1294~1309 (2001)
  21. Mittendorf, V, "Cloning of an endo-(1, 4)-beta-glucanase gene, celA, from the rumen bacterium Clostridium sp. ('C. longisporum') and characterization of its product, CelA, in Escherichia coli", J. Gen. Microbiol, 139, pp.3233~3242 (1993)
  22. 조수정, "Cloning and sequencing of cel5Z gene from Erwinia chrysanthemi PY35", MOLECULES AND CELLS, 10, pp.269~274, KOREAN SOC MOLECULAR & CELLULAR BIOLOGY
  23. Poole, D. M, "Nucleotide sequence of the Ruminococcus albus SY3 endoglucanase genes celA and celB", Mol. Gen. Genet, 223, pp.217~223 (1990)
  24. Sambrook, J, "Molecular cloning. A Laboratory Manual" (2001), Cold Spring Harbor Laboratory Press
  25. Satoshi, K, "Development and use of competitive PCR assays for the rumen cellulolytic bacteria: Fibrobacter succinogenes, Ruminococcus albus and Ruminococcus flavefaciens", FEMS Microbiol. Lett, 204, pp.361~366 (2001)
  26. Teather, R, "Use of Congo red-polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from the bovine rumen", Appl. Environ. Microbiol, 43, pp.770~780 (1982)
  27. Teeri, T. T, "Crystalline cellulose degradation: new insight into the function of cellobiohydrolases", Trends. Biotechnol, 15, pp.160~167 (1997)
  28. Wang, F, "Isolation and characterization of novel cellulase genes from uncultured microorganisms in different environmental niches", Microbio.l Res, 164, pp.650~657 (2009)
  29. Weimer, P. J, "Effect of diet on populations of three species of ruminal cellulolytic bacteria in lactating dairy cows", J. Dairy. Sci, 82, pp.122~134 (1999)
  30. Withers, S. G, "Mechanisms of glycosyl transferases and hydrolyses", Carbohydr. Polym, 44, pp.325~337 (2001)

관련 논문AI추천

Molecular cloning, purification, expression, and characterization of β-1, 4-endoglucanase gene (Cel5A) from Eubacterium cellulosolvens sp. isolated from Holstein steers’ rumen서성원, 서자겸, 이세영, 하종규, Byeongwoo Kim, Byung-Wook Cho, Seongkeun Cho, Tansol Park, Teaksoon Shin아세아·태평양축산학회 · Animal Bioscience2018 · 제31권 제4호Cloning and Characterization of an Endoglucanase Gene from Actinomyces sp. Korean Native Goat 40김성찬, 이상석, 조광근, 최윤재, 최은영, In Soon Choi, Jae Yeong Kim, Jin Duck Bok, Seung Ha Kang, Yeon Hee Hong아세아·태평양축산학회 · Animal Bioscience2016 · 제29권 제1호Screening and Characterization of a Novel Cellulase Gene from the Gut Microflora of Hermetia illucens Using Metagenomic Library구본성, 윤상홍, 이창묵, 한범수, Joon-Soo Sim, So-Hyeon Seo, Soo-Jin Kim, Young-Seok Lee한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2014 · 제24권 제9호Cloning and Characterization of Carboxylesterase (est2R) Gene from Cow Rumen Metagenomic Library김훈, 강태호, 김기환, 김민근, 김정호, 김태영, 윤한대농업생명과학연구원 · 농업생명과학연구2012 · 제46권 제3호Bacterial Cell Surface Display of a Multifunctional Cellulolytic Enzyme Screened from a Bovine Rumen Metagenomic Resource고경철, 송재준, 이빈나, 정대은, 최종현, Yunjon Han한국미생물·생명공학회 · Journal of Microbiology and Biotechnology2015 · 제25권 제11호Metagenome Analysis of Protein Domain Collocation within Cellulase Genes of Goat Rumen Microbes김희발, 남정래, 서재현, 윤두학, 임수연, 장종수, 조서애, 최현봉아세아·태평양축산학회 · Animal Bioscience2013 · 제26권 제8호

이 간행물의 다른 논문 (19건)