천궁 초작과 연작 재배지의 토양특성이 토양 곰팡이 군집에 미치는 영향
Effect of Soil Properties on Soil Fungal Community in First and Continuous Cultivation Fields of Cnidium officinale Makino
1
조회
0
다운로드
3
인용
0
참고문헌
키워드
초록
Background: This study investigated the effects of soil properties on the soil fungal community in first and continuous cultivation areas of Cnidium officinale Makino. Methods and Results: The soil fungal community was analyzed for relative abundance and principal coordinate analysis (PCoA) was conducted using Illumina MiSeq sequencing. The correlation between the soil chemical properties and the soil fungal community was assessed with distance-based linear models (DISTLM). The soil fungal community showed distinct clusters consisting in the continuous cultivation area of C. officinale Makino. PCoA and DISTLM indicated that soil pH, calcium, and available P2O5 significantly affected the soil fungal community in the cultivation area of C. officinale Makino. In addition, considering 5 different pathogenic fungi the relative abundance of Fusarium in the continuous cultivation area was significantly higher compared to that in the first cultivation area of C. officinale Makino. Conclusions: This study is important because it has determinined the effects of soil properties on the soil fungal community in both first and continuous cultivation areas of C. officinale Makino. Moreover, these results will be helpful to investigate the cause of continuous cropping obstacle in C. officinale Makino by examining the changes of soil fungal community.
Abstract
Background: This study investigated the effects of soil properties on the soil fungal community in first and continuous cultivation areas of Cnidium officinale Makino. Methods and Results: The soil fungal community was analyzed for relative abundance and principal coordinate analysis (PCoA) was conducted using Illumina MiSeq sequencing. The correlation between the soil chemical properties and the soil fungal community was assessed with distance-based linear models (DISTLM). The soil fungal community showed distinct clusters consisting in the continuous cultivation area of C. officinale Makino. PCoA and DISTLM indicated that soil pH, calcium, and available P2O5 significantly affected the soil fungal community in the cultivation area of C. officinale Makino. In addition, considering 5 different pathogenic fungi the relative abundance of Fusarium in the continuous cultivation area was significantly higher compared to that in the first cultivation area of C. officinale Makino. Conclusions: This study is important because it has determinined the effects of soil properties on the soil fungal community in both first and continuous cultivation areas of C. officinale Makino. Moreover, these results will be helpful to investigate the cause of continuous cropping obstacle in C. officinale Makino by examining the changes of soil fungal community.
참고문헌 (73)
- Alami MM, "Structure, function, diversity and composition of fungal communities in rhizospheric soil of Coptis chinensis Franch under a successive cropping system", Plants, 9, pp.244~ (2020)
- Atlas R, "Microbial ecology: Fundamentals and application", pp.322~323 (1998), Benjamin and Cummings Science Publishing
- Avidano L, "Characterization of soil health in an Italian polluted site by using microorganisms as bioindicators", Applied Soil Ecology, 30, pp.21~33 (2005)
- Bai L, "Analysis of the community compositions of rhizosphere fungi in soybeans continuous cropping fields", Microbiological Research, 180, pp.49~56 (2015)
- 백송이, "발병조건에 따른 무 품종들의 시들음병에 대한 저항성 차이", 원예과학기술지, 29(1), pp.48~52 (2011), 한국원예학회
- Bell TH, "Predictable bacterial composition and hydrocarbon degradation in Arctic soils following diesel and nutrient disturbance", ISME Journal, 7, pp.1200~1210 (2013)
- Berg G, "Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere", FEMS Microbiology Ecology, 68, pp.1~13 (2009)
- The study on highland herbs, "Bonghwa Highand Herbs Experimental Station(BHHES)", Bonghwa Highand Herbs Experimental Station, 26~27 (2012)
- Bridge P, "Soil fungi: Diversity and detection", Plant and Soil, 232, pp.147~154 (2001)
- Chen M, "Soil eukaryotic microorganism succession as affected by continuous cropping of peanutpathogenic and beneficial fungi were selected", PLoS One, 7, pp.e40659~ (2012)
- de Forest JL, "Available organic soil phosphorus has an important influence on microbial community composition", Soil Science Society in American Journal, 74, pp.2059~2066 (2010)
- Dong L, "Soil bacterial and fungal community dynamics in relation to Panax notoginseng death rate in a continuous cropping system", Scientific Reports, 6, pp.31802~ (2016)
- Gomes NCM, "Dynamics of fungal communities in bulk and maize rhizosphere soil in the tropics", Applied and Environmental Microbiology, 69, pp.3758~3766 (2003)
- Gustafson DJ, "Nutrient addition affects AM fungal performance and expression of plant", fungal feedback in three serpentine grasses, 2004, pp.259, 9~17
- Hannula SE, "A 3-year study reveals that plant growth stage, season and field site affect soil fungal communities while cultivar and GM-trait have minor effects", PLoS ONE, 7, pp.e33819~ (2012)
- Jeong JH, "Effects of phytotoxins on change of pH in the continuous cropping soil", Korean Journal of Soil Science and Fertilizer, 24, pp.17~21 (1991)
- 정충렬, "일천궁과 토천궁에서 발생하는 총채벌레류의 분자동정", 한국약용작물학회지, 27(1), pp.17~23 (2019), 한국약용작물학회[DOI]
- 정유진, "생강연작재배지에서 Pythium zingiberum 경감을 위한 녹비작물 재배효과", 한국자원식물학회지, 28(2), pp.271~278 (2015), 한국자원식물학회[DOI]
- 강승원, "인삼 연작지 수확 경과년수에 따른 토양화학성 및 뿌리썩음병 발생율의 변화", 한국약용작물학회지, 15(3), pp.157~161 (2007), 한국약용작물학회
- 김충회, "국내 토양병해 발생현황과 종합 관리방안", 식물병 연구, 8(3), pp.146~161 (2002), 한국식물병리학회
- 김다란, "도라지와 더덕 뿌리썩음병의 방제 효과에 미치는 재배환경의 영향", 농약과학회지, 20(2), pp.165~171 (2016), 한국농약과학회[DOI]
- 김종걸, "국내산 인삼 가공과정 중 difenoconazole의 가공 및 감소계수 연구", 한국식품과학회지, 43(3), pp.263~270 (2011), 한국식품과학회
- 김기윤, "일천궁의 연작재배에 따른 토양 이화학성 및 토양세균군집 연구", 한국환경농학회지, 39(1), pp.1~9 (2020), 한국환경농학회[DOI]
- Kim KY, "Structural and functional responses of microbial community with respect to salinity levels in a coastal reclamation land", Applied Soil Ecology, 137, pp.96~105 (2019)
- 김기윤, "토양세균군집과 산양삼 생육특성 간의 상관관계 연구", 환경생물, 37(3), pp.380~388 (2019), 한국환경생물학회[DOI]
- 김성택, "고추 종합 예찰방제 중 탄저병 예찰 타당성 포장 평가", 식물병 연구, 16(1), pp.66~73 (2010), 한국식물병리학회
- 권천섭, "고추 탄저병의 발병 생태 특성", 식물병 연구, 8(2), pp.120~123 (2002), 한국식물병리학회
- Lauber CL, "The influence of soil properties on the structure of bacterial and fungal communities across land-use types", Soil Biology and Biochemistry, 40, pp.2407~2415 (2008)
- 이순구, "인삼 뿌리썩음병 관련 Fusarium species와 그 병원성", 식물병 연구, 10(4), pp.248~259 (2004), 한국식물병리학회
- 이성우, "인삼 연작토양에서 관수 및 인삼뿌리 잔사물이 토양 미생물상 및뿌리썩음병 발생에 미치는 영향", 한국약용작물학회지, 26(5), pp.345~353 (2018), 한국약용작물학회[DOI]
- 이성우, "녹비작물 재배가 토양화학성 및 인삼뿌리썩음병 발생에 미치는 영향", 한국약용작물학회지, 25(1), pp.1~9 (2017), 한국약용작물학회[DOI]
- Li Y, "Studies on fungal communities and functional guilds shift in tea continuous cropping soils by high-throughput sequencing", Annals of Microbiology, 70, pp.7~ (2020)[DOI]
- 임근발, "옥수수 연작지에서 Fall panicum의 발생과 연작 피해 방지를 위한 대상작의 도입효과", 한국초지조사료학회지, 25(2), pp.97~104 (2005), 한국초지조사료학회
- Manici LM, "Relationship between root-endophytic microbial communities and replant disease in specialized apple growing areas in Europe", Applied Soil Ecology, 72, pp.207~214 (2013)
- Mazzola M, "Apple replant disease : Role of microbial ecology in cause and control", Annual Review of Phytopathology, 50, pp.45~65 (2012)
- Production performance of industrial drops, "Ministry of Agriculture, Food and Rural Affairs(MAFRA)", Ministry of Agriculture, Food and Rural Affairs, 8~22 (2018)
- Mondal F, "Recovery from autotoxicity in strawberry by supplementation of amino acids", Scientia Horticulturae, 164, pp.137~144 (2013)
- Monfort-Salvador I, "Impact of calcium associated to calcareous amendments on ectomycorrhizae in forests : A review", Journal of Soil Science and Plant Nutrition, 15, pp.217~231 (2015)
- 문진영, "Effect of Curing Treatments on the Fusarium Wilt (Fusarium oxysporum) of Sweet Potato (Ipomoea batatas L.)", 한국토양비료학회지(Korean Journal of Soil Science and Fertilizer), 51(3), pp.247~254 (2018), 한국토양비료학회[DOI]
- 남명현, "딸기 영양번식을 통한 Fusarium oxysporum f. sp. fragariae의 자묘 감염", 원예과학기술지, 29(3), pp.273~277 (2011), 한국원예학회
- Nayyar A, "Soil microbial quality associated with yield reduction in continuous-pea", Applied Soil Ecology, 43, pp.115~121 (2012)
- 오영지, "천궁(Cnidium officinale Makino) 지상부 추출물의 항산화 활성 평가", 한국약용작물학회지, 18(6), pp.373~378 (2010), 한국약용작물학회
- 박종철, "작부형태가 보리의 토양전염성 Bymovirus 발생과 매개균(Polymyxa graminis)의 밀도 변화에 미치는 영향", 식물병 연구, 16(2), pp.115~120 (2010), 한국식물병리학회
- 박준홍, "작약 연작재배지의 토양 이화학성 및 미생물 분포특성", 한국토양비료학회지(Korean Journal of Soil Science and Fertilizer), 44(5), pp.841~846 (2011), 한국토양비료학회
- 박명수, "토마토 시들음병에 대한 간편 대량 저항성 검정법", 원예과학기술지, 31(1), pp.110~116 (2013), 한국원예학회[DOI]
- Pettersson M, "Factors affecting the rates of change in soil bacterial communities", Ph. D., pp.2004
- Põlme S, "Biogeography of ectomycorrhizal fungi associated with alders (Alnus spp.) in relation to biotic and abiotic variables at the global scale", New Phytologist, 198, pp.1239~1249 (2013)
- Rousk J, "Soil bacterial and fungal communities across a pH gradient in an arable soil", The ISME Journal, 4, pp.1340~1351 (2010)
- Rural Development Administration(RDA), "Analysis manual of comprehensive examination laboratory(soil, plant, water and liquid manure)", Rural Development Administration, ~ (2013)
- Schloss PD, "Introducing mothur : Open source, platform-independent, community-supported software for describing and comparing microbial communities", Applied and Environmental Microbiology, 75, pp.7537~7541 (2009)
- 서영진, "기상요인이 일천궁의 증발산량 변화에 미치는 영향", 한국농림기상학회지, 20(4), pp.366~375 (2018), 한국농림기상학회
- 신지훈, "인삼 뿌리썩음병 발병에 미치는 토양전염성병원균과 토양환경요인", 한국토양비료학회지(Korean Journal of Soil Science and Fertilizer), 45(3), pp.370~376 (2012), 한국토양비료학회[DOI]
- Singh BK, "Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting methods", European Journal of Soil Science, 57, pp.72~82 (2006)
- Tan Y, "Rhizospheric soil and root endogenous fungal diversity and composition in response to continuous Panax notoginseng cropping practices", Microbiological Research, 194, pp.10~19 (2017)
- Tang J, "Impact of continuous Salvia miltiorrhiza cropping on rhizosphere actinomycetes and fungi communities", Annals of Microbiology, 65, pp.1267~1275 (2015)
- Ullah S, "The response of soil fungal diversity and community composition to long-term fertilization", Applied Soil Ecology, 140, pp.35~41 (2019)
- Walkley A, "An examination of the Degtjareff method for determining soil organic matter, and a proposed modification of the chromic acid titration method", Soil Science, 37, pp.29~38 (1934)
- Wei X, "Microbial community changes in the rhizosphere soil of healthy and rusty Panax ginseng and discovery of pivotal fungal genera associated with rusty roots", BioMed Research International, 2020, pp.8018525~ (2020)
- Wu L, "Effects of consecutive monoculture of Pseudostellaria heterophylla on soil fungal community as determined by pyrosequencing", Scientific Reports, 6, pp.26601~ (2016)
- Wu L, "Comparative metaproteomic analysis on consecutively Rehmannia glutinosa-monocultured rhizosphere soil", PLoS ONE, 6, pp.e20611~ (2011)[DOI]
- Wu Y, "pH is the primary determinant of the bacterial community structure in agricultural soils impacted by polycyclic aromatic hydrocarbon pollution", Scientific Reports, 7, pp.40093~ (2017)
- Wu Z, "Environmental factors shaping the diversity of bacterial communities that promote rice production", BMC Microbiology, 18, pp.51~ (2018)[DOI]
- Xiong W, "Different continuous cropping spans significantly affect microbial community membership and structure in a vanilla-grown soil as revealed by deep pyrosequencing", Microbial Ecology, 70, pp.209~218 (2015)
- Yang R, "The effects of cattle manure and garlic rotation on soil under continuous cropping of watermelon (Citrullus lanatus L.)", PLoS ONE, 11, pp.e0156515~ (2016)
- Yang T, "Phylogenetic imprint of woody plants on the soil mycobiome in natural mountain forests of eastern China", ISME Journal, 13, pp.686~697 (2019)
- Yao HY, "Effects of continuous cucumber cropping and alternative rotations under protected cultivation on soil microbial community diversity", Plant and Soil, 284, pp.195~203 (2006)
- Yao Q, "Dynamics of soil properties and fungal community structure in continuous-cropped alfalfa fields in Northeast China", PeerJ, 7, pp.e7127~ (2019)
- Yergeau E, "Next-generation sequencing of microbial communities in the Athabasca River and its tributaries in relation to oil sands mining activities", Applied and Environmental Microbiology, 78, pp.7626~7637 (2012)
- Zhang M, "Soil physicochemical properties and the rhizosphere soil fungal community in a Mulberry(Morus alba L.)", Alfalfa(Medicago sativa L.) intercropping system, 2019, pp.10, 167~
- Zhang T, "Highthroughput sequencing reveals the diversity and community structure of rhizosphere fungi of Ferula Sinkiangensis at different soil depths", Scientific Reports, 9, pp.6558~ (2019)[DOI]
- Zhou X, "Dynamics of the diversity of fungal and Fusarium communities during continuous cropping of cucumber in the greenhouse", FEMS Microbiology Ecology, 80, pp.469~478 (2012)
- Zhou X, "Changes in rhizosphere soil microbial communities in a continuously monocropped cucumber(Cucumis sativus L.)system", European Journal of Soil Biology, 60, pp.1~8 (2014)
- Zhou X, "Soil phenolics in a continuously mono-cropped cucumber(Cucumis sativus L.)system and their effects on cucumber seedling growth and soil microbial communities", European Journal of Soil Science, 63, pp.332~340 (2012)
