Mitochondrial DNA Sequence Variation of the Mason Bee, Osmia cornifrons (Hymenoptera: Apidae)
2
조회
0
다운로드
8
인용
0
참고문헌
키워드
초록
In order to understand geographic genetic variation and relationship among populations of the mason bee (Osmia cornifrons Radoszkowsky), which is used as pollinator for apple tree, we sequenced a portion of mitochondrial (mt) COI gene, which corresponds to “DNA Barcode” region (658 bp) from 81 O. cornifrons individuals collected over eight localities in Korea. The sequence data revealed overall moderate to low genetic diversity within species, with a maximum sequence divergence of 0.76%. Geographically, two haplotypes (BAROC01 and BAROC02) were widespread with a frequency of 82.7%, whereas several haplotypes were found in a locality as a single individual, suggesting that haplotype distribution can be summarized as coexistence of a few widespread haplotypes and several regionally restricted haplotypes. Overall, high rate of per generation female migration (Nm = 1.1 ~ infinite) and low level of geographic subdivision (FST = 0 ~ 0.315) among localities were characteristic. Although two populations (p < 0.026) were genetically subdivided from the remaining localities, no clear polarity was observed. Taken together, the nature of genetic divergence of the mason bee populations is characterized as one that possessing moderate to low genetic diversity, high gene flow, and wide spread haplotypes with a high frequency, concordant with the capability of dispersal in connection with the lack of historical biogeographic barriers.
Abstract
In order to understand geographic genetic variation and relationship among populations of the mason bee (Osmia cornifrons Radoszkowsky), which is used as pollinator for apple tree, we sequenced a portion of mitochondrial (mt) COI gene, which corresponds to “DNA Barcode” region (658 bp) from 81 O. cornifrons individuals collected over eight localities in Korea. The sequence data revealed overall moderate to low genetic diversity within species, with a maximum sequence divergence of 0.76%. Geographically, two haplotypes (BAROC01 and BAROC02) were widespread with a frequency of 82.7%, whereas several haplotypes were found in a locality as a single individual, suggesting that haplotype distribution can be summarized as coexistence of a few widespread haplotypes and several regionally restricted haplotypes. Overall, high rate of per generation female migration (Nm = 1.1 ~ infinite) and low level of geographic subdivision (FST = 0 ~ 0.315) among localities were characteristic. Although two populations (p < 0.026) were genetically subdivided from the remaining localities, no clear polarity was observed. Taken together, the nature of genetic divergence of the mason bee populations is characterized as one that possessing moderate to low genetic diversity, high gene flow, and wide spread haplotypes with a high frequency, concordant with the capability of dispersal in connection with the lack of historical biogeographic barriers.
참고문헌 (32)
- Bae, J. S., "Mitochondrial DNA sequence variation of the mushroom pest flies, Lycoriella mali (Diptera: Sciaridae) and Coboldia fuscipes (Diptera: Scatopsidae), in Korea", Appl. Entomol. Zool, 36, pp.451~457 (2001)
- Bandelt, H.-J., "Mitochondrial portraits of human populations using median networks", Genetics, 141, pp.743~753 (1995)
- Brower, A. V. Z., "Phylogeny of Heliconius butterflies inferred from mitochondrial DNA sequences (Lepidoptera: Nymphalidae)", Mol. Phylogenat. Evol, 3, pp.159~174 (1994)
- Excoffier, L., "Arlequin ver. 3.0: An integrated software package for population genetics data analysis", Evol. Bioinformatics Online, 1, pp.47~50 (2005)
- Excoffier, L., "Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data", Genetics, 131, pp.479~491 (1992)
- Felsenstein, J., "Confidence limits on phylogenics: an approach using the bootstrap", Evolution, 29, pp.783~791 (1985)
- Fitch, W. M., "Toward defining the course of evolution: minimal change for a specific tree topology", Syst. Zool, 20, pp.406~416 (1971)
- Folmer, O., "DNA primer for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates", Mol. Mar. Biol. Biotechnol, 3, pp.294~299 (1994)
- Hebert, P. D., "Biological identification through DNA barcodes", Proc. R. Soc. Lond (B), 통권 : 270, pp.313~321 (2003)
- Holsinger, K. E., "Hierarchical analysis of nucleotide diversity in geographically structured populations", Genetics, 142, pp.629~639 (1996)
- Huh, M.-S., "Nesting behavior of mason bee (Osmia cornifrons Radoszkowski) under the existence of pollen sources in apple orchard", Korean J. Apiculture, 12, pp.17~24 (1997)
- Kim, C. H., "Pollination of strawberry with Osmia conifrons Radoszkowski", RDA. J. Agri. Sci, 36, pp.45~55 (1994)
- Kim, I., "Genetic homogeneity in the domestic silkworm, Bombyx mori, and phylogenetic relationship between B. mori and wild silkworm, B. mandarina, using mitochondrial COI gene sequences", Int. J. Indust Entomol, 1, pp.9~17 (2000)
- 김기경, "Mitochondrial DNA Sequence Variation of the Tiny Dragonfly, Nannophya pygmaea (Odonata: Libellulidae)", International Journal of Industrial Entomology, 15(1), pp.47~58 (2007), 한국잠사학회
- Kim, I., "Polymorphism and genomic structure of the A+T-Rich region of mitochondrial DNA in the oriental mole cricket, Gryllotalpa Orientalis (Orthoptera; Gryllotalpidae)", Biochem. Genet, 45, pp.589~610 (2007)
- Kim, J. G., "Genetic subdivision of the firefly, Luciola lateralis (Coleoptera: Lampyridae), in Korea detected by mitochondrial COI gene sequences", Korean J. Genetics, 23, pp.203~219 (2001)
- Kim, I., "Mitochondrial COI-gene sequence-based population genetic structure of the diamondback moth, Plutella xylostella, in Korea", Korean J. Genetics, 25, pp.155~179 (2003)
- Kim, I., "Habitat islands, genetic diversity, and gene flow in a Patagonian rodent", Mol. Ecol, 7, pp.667~678 (1998)
- Kimura, M., "A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences", J. Mol. Evol, 16, pp.111~120 (1980)
- Kwon, Y. J., "Phylogenetic relationship of Osimia spp. In Korea based in mitochondrial COI gene sequences (Hymenoptera: Megachilidae)", J. Asia-Pacific Entomol, 6, pp.7~14 (2003)
- Kwon, Y. J., "Studies on the utilization of fruit pollinating insects (2nd report). Agr. Tech. Inst. Kyungpook Natl. Univ., Taegu", ~ (1996)
- Lee, J. W., "Insect’s Life in Korea: Hymenoptera, Diptera, Mecoptera, Neuroptera, and Demaptera" (1998), Samsun Munhwa Press Co., Institute of Korean Insect Research, Korea Univ
- Lee, S. C., "Mitochondrial DNA sequence-based population genetic structure of the firefly, Pyrocoelia rufa (Coleoptera: Lampyridae)", Biochem. Genet, 41, pp.427~452 (2003)
- Li, J., "Genetic variation of the diamondback moth, Plutella xylostella (Lepidoptera: Yponomeutidae) in China inferred from mitochondrial COI gene sequences", Euro. J. Entomol, 103, pp.605~611 (2006)
- Mun, J. H., "Genetic variation among Asian populations of rice planthoppers, Nilaparvata legens and Sogatella furcifera (Hemiptera: Delphacidae): mitochondrial DNA sequences", Bull. Entomol. Res, 89, pp.245~253 (1999)
- Neigel, J. E., "Application of a random walk model to geographic distributions of animal mitochondrial DNA variation", Genetics, 135, pp.1209~1220 (1993)
- Thomson, J. D., "The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools", Nucleic Acids Res, 24, pp.173~216 (1997)
- Soulé, M. E., "Conservation Biology: the science of scarcity and diversity" (1986), Sinauer Associates, Sunderland, MA
- Sperling, F. A. H., "Mitochondrial DNA sequence variation in the spruce budworm species complex (Choristoneura: Lepidoptera)", Mol. Biol. Evol, 11, pp.656~665 (1994)
- Swofford, D. L., "PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Method) ver. 4.10, Sunderland" (2002), MA: Sinauer Associates
- Yoon, H. J., "Genetic homogeneity of the Korean native bumble bee, Bombus ardens (Hymenoptera: Apidae), detected by mitochondrial COI gene sequences", Int. J. Indust. Entomol, 6, pp.63~68 (2003)
- Wilson, E. O., "The Diversity of Life, Belknap Press of Harvard Univ" (1992), Cambridge, Mass
