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Intrinsically disordered fold of a PIAS1–binding domain of CP2b

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초록

The transcription factor CP2 regulates various biological systems at diverse tissues and cells. However, none of the four CP2 isoforms has been solved in structure yet. In particular, two different regions of the CP2b isoform have been characterized to interact with the PIAS1 in nucleus to regulate the a-globin gene expression. Among them, in this study, the region encompassing residues 251-309 of CP2b was prepared as a recombinant protein and its solution structure was characterized by NMR spectroscopy. The results indicated that the CP2b(251-309) fold belongs to typical IDRs (intrinsically disordered regions), likely to facilitate promiscuous interactions with various target proteins. Unfortunately, however, its interaction with the N-terminal domain of PIAS1 (residues 1-70), which has been identified as one of the CP2b-binding sites, was not observed in the NMR-based titration experiments. Therefore, it could be postulated that the 251-309 region of CP2b would not contact with the PIAS1(1-70), but alternatively interact with another CP2b-binding region that encompasses residues 400-651 of PIAS1.

Abstract

The transcription factor CP2 regulates various biological systems at diverse tissues and cells. However, none of the four CP2 isoforms has been solved in structure yet. In particular, two different regions of the CP2b isoform have been characterized to interact with the PIAS1 in nucleus to regulate the a-globin gene expression. Among them, in this study, the region encompassing residues 251-309 of CP2b was prepared as a recombinant protein and its solution structure was characterized by NMR spectroscopy. The results indicated that the CP2b(251-309) fold belongs to typical IDRs (intrinsically disordered regions), likely to facilitate promiscuous interactions with various target proteins. Unfortunately, however, its interaction with the N-terminal domain of PIAS1 (residues 1-70), which has been identified as one of the CP2b-binding sites, was not observed in the NMR-based titration experiments. Therefore, it could be postulated that the 251-309 region of CP2b would not contact with the PIAS1(1-70), but alternatively interact with another CP2b-binding region that encompasses residues 400-651 of PIAS1.

참고문헌 (15)

  1. J. Veljkovic, , Gene, 343, pp.23~ (2004)
  2. 김철근, "Transcription Factor CP2 Is Involved in Activating mBMP4 in Mouse Mesenchymal Stem Cells", Molecules and Cells, 17(3), pp.454~461 (2004), 한국분자세포생물학회
  3. H. C. Kang, , Nucleic Acids Res, 38, pp.5456~ (2010)
  4. H. J. Chae, , Biochem. Biophys. Res. Commun, 380, pp.813~ (2009)
  5. K. M. Barnhart, , Mol. Cell Biol, 8, pp.4270~ (1988)
  6. C. G. Kim, , Mol. Cell Biol, 8, pp.4270~ (1988)
  7. D. W. Sim, , BMP Rep, 42, pp.387~ (2009)
  8. 원형식, "Oxidation-Induced Conformational Change of a Prokaryotic Molecular Chaperone, Hsp33, Monitored by Selective Isotope Labeling using 1H NMR spectroscopy coupled with multivariate analysis", Journal of the Korean Magnetic Resonance Society, 15(2), pp.137~145 (2011), 한국자기공명학회
  9. V. N. Uversky, , Biochim. Biophys. Acta, 1834, pp.932~ (2013)
  10. R. Konrat, , J. Magn. Reson, 241, pp.74~ (2014)
  11. Do-Hyoung Kim, "Multiple hTAFII31-binding motifs in the intrinsically unfolded transcriptional activation domain of VP16", BMB reports, 42(7), pp.411~417 (2009), 한국생화학분자생물학회
  12. Si-Hyung Lee, "Structural Characterization of an Intrinsically Unfolded Mini-HBX Protein from Hepatitis B Vi-rus", Molecules and Cells, 34(2), pp.165~169 (2012), 한국분자세포생물학회
  13. S. H. Lee, , Curr. Prot. Pept. Sci, 13, pp.34~ (2012)
  14. 심대원, "Structural Characterization of the J-domain of Tid1, a Mitochondrial Hsp40", DnaJ Protein, 2012, pp.16(1), 22~33[DOI]
  15. 김정목, "Mainchain NMR Assignments and secondary structure prediction of the C-terminal domain of BldD, a developmental transcriptional regulator from StreptomycescoelicolorA3(2)", Journal of the Korean Magnetic Resonance Society, 17(1), pp.59~66 (2013), 한국자기공명학회

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